VisiNets

With Visinets Inc. we have developed a novel tool for graphical modeling of signaling pathways, Visinets.  This tool allows for both modeling and visualization of biological networks in a user-friendly format. The Visinets mathematical approach is based on causal mapping (CMAP) with simplified ODEs that have been fully integrated with graphical interface.  It offers more competent analysis of pathway dynamics than VisiPaths.

For more details refer to our recent publication: Spychala J, Spychala P, Gomez S, Weinreb GE. Visinets: A Web-Based Pathway Modeling and Dynamic Visualization Tool. Yoon B-J, ed. PLoS ONE. 2015;10(5):e0123773. doi:10.1371/journal.pone.0123773.

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4447416/